BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B02LP1|AL428488
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1309 1698 0.0
>3x_Contig1309
Length = 8998
Score = 1698 bits (852), Expect = 0.0
Identities = 885/897 (98%), Gaps = 4/897 (0%)
Strand = Plus / Plus
Query: 1 gaacaacacccaaggagccaactagggcagcagcaccatcagaaagaatgtcaccratam 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2184 gaacaacacccaaggagccaactagggcagcagcaccatcagaaagaatgtcaccg-tac 2242
Query: 61 aagtatatggtgcaacaacaacgtcgaaacattctggttctctgaacattctgtaaacca 120
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2243 aagttt--ggtgcaacaacaacgtcgaaacattctggttctctgaacattctgtaaacca 2300
Query: 121 tggaatcgacgatttgttcattatattggacacctccgtacttgtccttgttagcttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2301 tggaatcgacgatttgttcattatattggacacctccgtacttgtccttgttagcttcat 2360
Query: 181 aagtttctctgcatacctctctgaaaagaccatcagattgtgaaagaacattggatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2361 aagtttctctgcatacctctctgaaaagaccatcagattgtgaaagaacattggatttgt 2420
Query: 241 gagtaactgttaaagtggcatgaccgttctgttmcaatctctgttgagcgatttgtagag 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2421 gagtaactgttaaagtggcatgaccgttctgttccaatctctgttgagcgatttgtagag 2480
Query: 301 cgatagtagcaatgtttttggttgctatttcggtaattctcttggtagcatctgcaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2481 cgatagtagcaatgtttttggttgctatttcggtaattctcttggtagcatctgcaactc 2540
Query: 361 tggttccggtggcttcatcgatgtatgacttttccaatttaatgtataaatcttcagtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 tggttccggtggcttcatcgatgtatgacttttccaatttaatgtataaatcttcagtgt 2600
Query: 421 tttctctaacgatgactaggtcaacttttctgtccttagtaccatcaacagatttaacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2601 tttctctaacgatgactaggtcaacttttctgtccttagtaccatcaacagatttaacag 2660
Query: 481 gacgaacgttagcgaaaagtcccaaattctttcttagggcaacgattggagaagagtaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2661 gacgaacgttagcgaaaagtcccaaattctttcttagggcaacgattggagaagagtaac 2720
Query: 541 cttcaaccttagtcgttggtgattgcacagcaccaaataaagcaccttcacattggttct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2721 cttcaaccttagtcgttggtgattgcacagcaccaaataaagcaccttcacattggttct 2780
Query: 601 tcaagatatcaatggtttcgtcagggagtgccttaccggtgttttggaaggtttcccaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2781 tcaagatatcaatggtttcgtcagggagtgccttaccggtgttttggaaggtttcccaac 2840
Query: 661 cagcttgcaaatcaatgaatttwaacgatagaccgtactttgggttcaatgattctwaga 720
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 2841 cagcttgcaaatcaatgaatttaaacgatagaccgtactttgggttcaatgattctaaga 2900
Query: 721 tcttcttaccagcaggaataacttctttaccaataccatcacctggaattaaaccaattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2901 tcttcttaccagcaggaataacttctttaccaataccatcacctggaattaaaccaattg 2960
Query: 781 ttaaattcttcgcattggaagcgtaa-sacgacgggacaattgaatgaaacgtgttctca 839
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 2961 ttaaattcttcgcattggaagcgtaagcacgacgggacaattgaatgaaacgtgttctca 3020
Query: 840 tcatattgaatggttgttatatagcgaaatgaaamaattcgctgcttgatcttcggg 896
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3021 tcatattgaatggttgttatatagcgaaatgaaacaattcgctgcttgatcttcggg 3077
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6494
Number of Sequences: 1807
Number of extensions: 6494
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)